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A Functional Medicine Recurrent Bacterial Vaginosis Protocol: Comprehensive Testing, Supplements, and Nutritional Considerations

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Our specialists regularly review advancements in health and wellness, ensuring our articles are updated with the newest information as it becomes accessible.
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Up to 75% of women will experience a vaginal yeast infection in their lifetime, so it's understandable why many women will assume they have a yeast infection when they begin to experience vaginal symptoms. However, other conditions can present with similar symptoms, and one study showed that only about one-third of women are correct when they self-diagnose vaginal yeast.

Bacterial vaginosis is actually the most common cause of vaginal discharge worldwide. This article aims to bring attention to this prevalent women's health concern and provides a sample treatment protocol that healthcare providers can adapt for their own use in clinical practice.

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What Is Bacterial Vaginosis?

Bacterial vaginosis (BV) is one of the most common types of vaginal infections in women of reproductive age, characterized by an imbalance in the vaginal flora. In the United States, BV affects 21 million women.

What Causes Bacterial Vaginosis?

The vaginal microbiome is the community of microorganisms predominantly composed of various species of Lactobacillus. Lactobacillus bacteria maintain a healthy vaginal environment by producing lactic acid, which lowers the pH of the vagina to around 4.5. This acidic environment is inhospitable to many pathogenic microorganisms, thus providing a natural defense against infections.

BV occurs when there is a disruption in the normal distribution of bacteria within the vagina: Lactobacillus concentrations are reduced, while other types of anaerobic bacteria, such as Gardnerella vaginalis, begin to overgrow (14). 

Several factors have been identified as potential contributors to the development of BV by disrupting the normal balance of the vaginal microbiome. These include:

  • Antibiotics
  • Vaginal douching
  • Use of spermicides
  • Hormonal changes
  • Sexual intercourse

BV is more common in people who are sexually active, have multiple sex partners, whose sex partner has BV, and do not use condoms. Despite these risk factors, it's important to note that BV is not classified as an STI. (14, 23)

Bacterial Vaginosis Signs & Symptoms

Because BV often doesn't cause any symptoms, many people won't know they have it (31). 

When they do occur, the main symptoms of BV include:

  • Thin vaginal discharge that looks white, gray, green, and/or foamy
  • Strong, fishy vaginal odor
  • Vaginal itching
  • Pain or burning with urination and during sex 

How to Diagnose Bacterial Vaginosis

Without a physical exam and laboratory testing, it's hard to know if BV or another vaginal infection is causing your symptoms. Anyone who suspects they have BV should schedule an appointment with their doctor to ensure the appropriate tests are conducted.

Step 1: Use the Amsel Criteria

A diagnosis of BV is typically presumed based on patient-reported symptoms and is confirmed by obtaining a vaginal swab and preparing a wet mount slide. A vaginal wet mount is a test where your doctor places a sample of discharge on a glass slide, mixes it with a salt solution, and examines it under a microscope. 

According to the Amsel Criteria, BV can be diagnosed when at least three of the following criteria are met:

  • Homogenous vaginal discharge is present
  • Vaginal fluid pH is greater than 4.5
  • "Whiff test" is positive: an amine (fishy) odor is noted when 10% potassium hydroxide solution is added to vaginal secretions
  • Clue cells are visualized on wet mount microscopy

If you have three or more confirmed episodes of BV in 12 months, you will be diagnosed with recurrent BV.

Step 2: Order Labs to Understand the Root Cause of BV

Your doctor may also recommend ordering additional labs to identify predisposing factors to infection (especially in patients with recurrent BV) and personalize treatment options. These lab results can help doctors personalize treatment recommendations to improve patient outcomes and prevent BV recurrence.

Comprehensive Vaginal Assessment

Various tests can provide a comprehensive evaluation of the vaginal environment. While a pelvic exam and wet mount assist in diagnosing BV, they don't identify the causative bacterial pathogen, nor do they rule out the presence of other infections, such as vulvovaginal candidiasis, that can cooccur with BV. 

The following panels are available to rule out other infections and identify specific dysbiotic shifts in the vaginal microbiota that predispose an individual to opportunistic bacterial overgrowth: 

Comprehensive Hormonal Assessment

Estrogen stimulates Lactobacillus growth and promotes the health of vaginal tissues. When estrogen levels are low, Lactobacillus populations decrease, and vaginal tissues become thinner and drier. These changes create a favorable environment for anaerobic bacteria to overgrow. (21, 25)

One study also found that irregular vaginal bleeding was a significant risk factor for recurrent BV, further supporting the notion that hormonal imbalances play a role in BV etiology. 

The following panels measure female reproductive hormones to screen for hormonal imbalances that can contribute to suboptimal vaginal health:

Intestinal Microbiome Analysis

Intestinal dysbiosis can contribute to recurrent BV. The gastrointestinal tract can act as a reservoir for bacteria implicated in BV. Given the proximity of the vagina to the anus, these bacteria can migrate from the gut to the vagina, disrupting the normal balance of vaginal microbiota.

Intestinal dysbiosis can weaken immune defenses, making the vaginal area more susceptible to infection, and promote systemic inflammation that fosters pathogenic bacterial growth. Additionally, because the gut microbiota influences estrogen metabolism, dysbiosis can disrupt estrogen levels, affecting the vaginal epithelium and reducing the growth of protective lactobacilli. (7

The following stool tests are excellent options to screen for intestinal dysbiosis and gastrointestinal infections: 

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Treatment Plan for Bacterial Vaginosis

Effective treatment protocols for BV alleviate symptoms, prevent recurrences, and reduce the risk of associated health complications.

Step 1: Eradicate Bacterial Overgrowth

Here's Why This Is Important:

It is recommended to treat BV to resolve vaginal symptoms and prevent complications associated with untreated infections (discussed in more detail below). 

How Do You Do This?

First-line therapies for treating BV include seven-day courses of oral or intravaginal metronidazole or intravaginal clindamycin. Evidence has not suggested that one option is significantly more effective than another. (22

Inserted vaginally, boric acid has been used for over a century to treat vaginal infections. Boric acid promotes a healthy vaginal pH and can disrupt biofilms produced by bacteria, which can contribute to BV recurrence. Studies show that intravaginal boric acid (600 mg for 2-3 weeks), used alone or with antibiotics, is an effective treatment option for BV. (1, 34

Step 2: Prevent Reoccurrence

Why Is This Important?

Up to 80% of patients will experience a recurrence of BV within nine months of completing initial antibiotic treatment.

How Do You Do This?

Diets high in refined carbohydrates and sugars can disrupt the natural balance of the intestinal and vaginal microbiomes, leading to dysbiosis. By limiting the intake of refined carbohydrates and sugars and increasing the intake of fiber-rich foods, it is possible to prevent the development of dysbiosis and maintain a healthy microbiome. 

Certain dietary components have been associated with a decreased risk of severe BV. Reducing dietary fat and eating adequate folate, vitamin A, and calcium protect against BV. (19

  • Folate-Rich Foods: fruits, vegetables, grains, and legumes 
  • Vitamin A-Rich Foods: liver, fish, eggs, dairy products, and orange/yellow vegetables
  • Calcium-Rich Foods: dairy products, bone-in fish, cruciferous vegetables, and tofu

Probiotics are beneficial bacteria that can help restore and maintain a balanced vaginal microbiome. 

  • Probiotic-rich foods like yogurt, kefir, sauerkraut, and kimchi can introduce beneficial bacteria to the gut, improving intestinal and vaginal health.
  • Probiotic supplements, specifically those containing Lactobacillus rhamnosus, Lactobacillus reuteri, and Lactobacillus acidophilus, can be used orally and intravaginally during and after antibiotic therapy to increase the cure rate and prevent infection recurrence. (10, 18, 30, 32)

Vitamin C's acidic and antimicrobial properties have been shown to restore the acidic pH and promote a healthy vaginal environment. One study found that 250 mg of intravaginal vitamin C reduced BV recurrence by nearly 50%.

The Risks of Untreated Bacterial Vaginosis

Untreated BV can lead to several health complications, including increased risk of: 

  • Contracting a sexually transmitted infection (STI), such as HIV, HSV, chlamydia, or gonorrhea
  • Infection after gynecological surgery
  • Pelvic inflammatory disease (PID)
  • Pregnancy-related complications, such as preterm birth and low birth weight

[signup]

Key Takeaways:

  • BV is a common vaginal infection that affects millions of women and often reoccurs after treatment. 
  • Adding additional nutritional and supplemental therapies to antibiotic treatment can address the root causes of BV, enhance eradication rates, and prevent infection recurrence.

Up to 75% of women may experience a vaginal yeast infection in their lifetime, so it's understandable why many women might assume they have a yeast infection when they begin to experience vaginal symptoms. However, other conditions can present with similar symptoms, and one study showed that only about one-third of women are correct when they self-diagnose vaginal yeast.

Bacterial vaginosis is actually the most common cause of vaginal discharge worldwide. This article aims to bring attention to this prevalent women's health concern and provides a sample treatment protocol that healthcare providers can adapt for their own use in clinical practice.

[signup]

What Is Bacterial Vaginosis?

Bacterial vaginosis (BV) is one of the most common types of vaginal infections in women of reproductive age, characterized by an imbalance in the vaginal flora. In the United States, BV affects 21 million women.

What Causes Bacterial Vaginosis?

The vaginal microbiome is the community of microorganisms predominantly composed of various species of Lactobacillus. Lactobacillus bacteria help maintain a healthy vaginal environment by producing lactic acid, which lowers the pH of the vagina to around 4.5. This acidic environment is inhospitable to many pathogenic microorganisms, thus providing a natural defense against infections.

BV occurs when there is a disruption in the normal distribution of bacteria within the vagina: Lactobacillus concentrations are reduced, while other types of anaerobic bacteria, such as Gardnerella vaginalis, begin to overgrow (14). 

Several factors have been identified as potential contributors to the development of BV by disrupting the normal balance of the vaginal microbiome. These include:

  • Antibiotics
  • Vaginal douching
  • Use of spermicides
  • Hormonal changes
  • Sexual intercourse

BV is more common in people who are sexually active, have multiple sex partners, whose sex partner has BV, and do not use condoms. Despite these risk factors, it's important to note that BV is not classified as an STI. (14, 23)

Bacterial Vaginosis Signs & Symptoms

Because BV often doesn't cause any symptoms, many people won't know they have it (31). 

When they do occur, the main symptoms of BV may include:

  • Thin vaginal discharge that looks white, gray, green, and/or foamy
  • Strong, fishy vaginal odor
  • Vaginal itching
  • Pain or burning with urination and during sex 

How to Diagnose Bacterial Vaginosis

Without a physical exam and laboratory testing, it's hard to know if BV or another vaginal infection is causing your symptoms. Anyone who suspects they have BV should schedule an appointment with their doctor to ensure the appropriate tests are conducted.

Step 1: Use the Amsel Criteria

A diagnosis of BV is typically presumed based on patient-reported symptoms and is confirmed by obtaining a vaginal swab and preparing a wet mount slide. A vaginal wet mount is a test where your doctor places a sample of discharge on a glass slide, mixes it with a salt solution, and examines it under a microscope. 

According to the Amsel Criteria, BV can be diagnosed when at least three of the following criteria are met:

  • Homogenous vaginal discharge is present
  • Vaginal fluid pH is greater than 4.5
  • "Whiff test" is positive: an amine (fishy) odor is noted when 10% potassium hydroxide solution is added to vaginal secretions
  • Clue cells are visualized on wet mount microscopy

If you have three or more confirmed episodes of BV in 12 months, you will be diagnosed with recurrent BV.

Step 2: Order Labs to Understand the Root Cause of BV

Your doctor may also recommend ordering additional labs to identify predisposing factors to infection (especially in patients with recurrent BV) and personalize treatment options. These lab results can help doctors personalize treatment recommendations to improve patient outcomes and help manage BV recurrence.

Comprehensive Vaginal Assessment

Various tests can provide a comprehensive evaluation of the vaginal environment. While a pelvic exam and wet mount assist in diagnosing BV, they don't identify the causative bacterial pathogen, nor do they rule out the presence of other infections, such as vulvovaginal candidiasis, that can cooccur with BV. 

The following panels are available to rule out other infections and identify specific dysbiotic shifts in the vaginal microbiota that may predispose an individual to opportunistic bacterial overgrowth: 

Comprehensive Hormonal Assessment

Estrogen supports Lactobacillus growth and promotes the health of vaginal tissues. When estrogen levels are low, Lactobacillus populations may decrease, and vaginal tissues can become thinner and drier. These changes might create a favorable environment for anaerobic bacteria to overgrow. (21, 25)

One study also found that irregular vaginal bleeding was a significant risk factor for recurrent BV, further supporting the notion that hormonal imbalances may play a role in BV etiology. 

The following panels measure female reproductive hormones to screen for hormonal imbalances that can contribute to suboptimal vaginal health:

Intestinal Microbiome Analysis

Intestinal dysbiosis may contribute to recurrent BV. The gastrointestinal tract can act as a reservoir for bacteria implicated in BV. Given the proximity of the vagina to the anus, these bacteria can migrate from the gut to the vagina, disrupting the normal balance of vaginal microbiota.

Intestinal dysbiosis can weaken immune defenses, making the vaginal area more susceptible to infection, and promote systemic inflammation that fosters pathogenic bacterial growth. Additionally, because the gut microbiota influences estrogen metabolism, dysbiosis can disrupt estrogen levels, affecting the vaginal epithelium and reducing the growth of protective lactobacilli. (7

The following stool tests are options to consider for screening for intestinal dysbiosis and gastrointestinal infections: 

[signup]

Treatment Plan for Bacterial Vaginosis

Effective treatment protocols for BV aim to alleviate symptoms, help prevent recurrences, and reduce the risk of associated health complications.

Step 1: Address Bacterial Overgrowth

Here's Why This Is Important:

It is recommended to address BV to help resolve vaginal symptoms and reduce the risk of complications associated with untreated infections (discussed in more detail below). 

How Do You Do This?

First-line therapies for managing BV may include seven-day courses of oral or intravaginal metronidazole or intravaginal clindamycin. Evidence has not suggested that one option is significantly more effective than another. (22

Inserted vaginally, boric acid has been used for over a century to support vaginal health. Boric acid may help maintain a healthy vaginal pH and can disrupt biofilms produced by bacteria, which may contribute to BV recurrence. Studies show that intravaginal boric acid (600 mg for 2-3 weeks), used alone or with antibiotics, is an option for managing BV. (1, 34

Step 2: Support Reoccurrence Prevention

Why Is This Important?

Up to 80% of patients may experience a recurrence of BV within nine months of completing initial antibiotic treatment.

How Do You Do This?

Diets high in refined carbohydrates and sugars can disrupt the natural balance of the intestinal and vaginal microbiomes, leading to dysbiosis. By considering limiting the intake of refined carbohydrates and sugars and increasing the intake of fiber-rich foods, it may be possible to help prevent the development of dysbiosis and support a healthy microbiome. 

Certain dietary components have been associated with a decreased risk of severe BV. Reducing dietary fat and eating adequate folate, vitamin A, and calcium may support against BV. (19

  • Folate-Rich Foods: fruits, vegetables, grains, and legumes 
  • Vitamin A-Rich Foods: liver, fish, eggs, dairy products, and orange/yellow vegetables
  • Calcium-Rich Foods: dairy products, bone-in fish, cruciferous vegetables, and tofu

Probiotics are beneficial bacteria that may help restore and maintain a balanced vaginal microbiome. 

  • Probiotic-rich foods like yogurt, kefir, sauerkraut, and kimchi can introduce beneficial bacteria to the gut, potentially improving intestinal and vaginal health.
  • Probiotic supplements, specifically those containing Lactobacillus rhamnosus, Lactobacillus reuteri, and Lactobacillus acidophilus, can be used orally and intravaginally during and after antibiotic therapy to support the cure rate and help prevent infection recurrence. (10, 18, 30, 32)

Vitamin C's acidic and antimicrobial properties have been shown to help restore the acidic pH and promote a healthy vaginal environment. One study found that 250 mg of intravaginal vitamin C reduced BV recurrence by nearly 50%.

The Risks of Untreated Bacterial Vaginosis

Untreated BV can lead to several health complications, including increased risk of: 

  • Contracting a sexually transmitted infection (STI), such as HIV, HSV, chlamydia, or gonorrhea
  • Infection after gynecological surgery
  • Pelvic inflammatory disease (PID)
  • Pregnancy-related complications, such as preterm birth and low birth weight

[signup]

Key Takeaways:

  • BV is a common vaginal infection that affects millions of women and often reoccurs after treatment. 
  • Adding additional nutritional and supplemental therapies to antibiotic treatment may help address the root causes of BV, enhance eradication rates, and support infection recurrence prevention.
The information provided is not intended to be a substitute for professional medical advice. Always consult with your doctor or other qualified healthcare provider before taking any dietary supplement or making any changes to your diet or exercise routine.
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Lab Tests in This Article

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  7. Cloyd, J. (2023, August 14). Top Labs To Run Bi-Annually On Your Patients Who Suffer From Reoccurring Bacterial Vaginosis. Rupa Health. https://www.rupahealth.com/post/top-labs-to-run-bi-annually-on-your-patients-who-suffer-from-reoccurring-bacterial-vaginosis
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  13. Greenan, S. (2021, December 8). 5 Probiotic-Rich Foods To Eat Instead Of Taking Supplements. Rupa Health. https://www.rupahealth.com/post/the-different-types-of-probiotics-health-benefits
  14. Kairys, N., & Garg, M. (2023, July 4). Bacterial Vaginosis. PubMed; StatPearls Publishing. https://www.ncbi.nlm.nih.gov/books/NBK459216/
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  16. Krasnopolsky, V. N., Prilepskaya, V. N., Polatti, F., et al. (2013). Efficacy of Vitamin C Vaginal Tablets as Prophylaxis for Recurrent Bacterial Vaginosis: A Randomised, Double-Blind, Placebo-Controlled Clinical Trial. Journal of Clinical Medicine Research, 5(4). https://doi.org/10.4021/jocmr1489w
  17. Madden, T., Grentzer, J. M., Secura, G. M., et al. (2012). Risk of Bacterial Vaginosis in Users of the Intrauterine Device: A Longitudinal Study. Sexually Transmitted Diseases, 39(3), 217–222. https://doi.org/10.1097/OLQ.0b013e31823e68fe
  18. Martinez, R. C. R., Franceschini, S. A., Patta, M. C., et al. (2009). Improved cure of bacterial vaginosis with single dose of tinidazole (2 g), Lactobacillus rhamnosus GR-1, and Lactobacillus reuteri RC-14: a randomized, double-blind, placebo-controlled trial. Canadian Journal of Microbiology, 55(2), 133–138. https://doi.org/10.1139/w08-102
  19. Neggers, Y. H., Nansel, T. R., Andrews, W. W., et al. (2007). Dietary Intake of Selected Nutrients Affects Bacterial Vaginosis in Women. The Journal of Nutrition, 137(9), 2128–2133. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2663425/
  20. Neibling, K. (2023, March 3). A Functional Medicine Protocol for Reoccurring Pelvic Inflammatory Disease. Rupa Health. https://www.rupahealth.com/post/a-functional-medicine-protocol-to-reoccurring-pelvic-inflammatory-disease
  21. Olson, A. T. (2022, June 20). Can estrogen improve vaginal health for postmenopausal women? Fred Hutch. https://www.fredhutch.org/en/news/spotlight/2022/06/vidd-srinivasan-jamanetw.html
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  28. Sweetnich, J. (2023, May 8). Vitamin B9 (Folate) 101. Rupa Health. https://www.rupahealth.com/post/understanding-the-importance-of-folate-testing-and-proper-supplementation-for-optimal-health
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  31. What is bacterial vaginosis? (2019). Planned Parenthood. https://www.plannedparenthood.org/learn/health-and-wellness/vaginitis/what-bacterial-vaginosis
  32. Ya, W., Reifer, C., & Miller, L. E. (2010). Efficacy of vaginal probiotic capsules for recurrent bacterial vaginosis: a double-blind, randomized, placebo-controlled study. American Journal of Obstetrics and Gynecology, 203(2), 120.e1–120.e6. https://doi.org/10.1016/j.ajog.2010.05.023
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  34. Zeron Mullins, M., & Trouton, K. M. (2015). BASIC study: is intravaginal boric acid non-inferior to metronidazole in symptomatic bacterial vaginosis? Study protocol for a randomized controlled trial. Trials, 16(1). https://doi.org/10.1186/s13063-015-0852-5
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