Human leukocyte antigens (HLAs) are proteins encoded by genes on chromosome 6 that help the immune system recognize and respond to foreign threats. As part of the major histocompatibility complex (MHC), HLAs such as HLA-DRB4 play critical roles in immune defense, organ transplantation, and disease susceptibility.
The human leukocyte antigen (HLA) system is a group of genes found on chromosome 6 that helps the immune system recognize and respond to foreign substances like viruses and cancer cells. HLAs are the human version of a larger group of proteins called the major histocompatibility complex (MHC).
There are three main types of HLA genes:
Class I HLA proteins are found on almost all cells in the body and present pieces of proteins (called peptides) to CD8+ T cells, a type of immune cell that can destroy infected or damaged cells.
Class II HLAs are found on immune cells like B cells and macrophages, and participate in immune system activation by presenting peptides to CD4+ helper T cells.
Class III genes make proteins involved in other immune functions, but they don't present peptides.
HLAs are highly variable between individuals, which makes them essential for immune defense—but also makes organ matching for transplantation more complicated.
HLA-DRB4 is part of the human leukocyte antigen (HLA) system—a group of genes on chromosome 6 that helps the immune system tell the difference between self and non-self. These genes belong to the major histocompatibility complex (MHC), which plays a key role in immune defense.
HLA-DRB4 encodes a beta chain of the HLA class II protein, which pairs with an alpha chain (from the DRA gene) to form a molecule that displays antigens to CD4+ helper T cells. These class II molecules are found on antigen-presenting cells like B cells, macrophages, and dendritic cells and are essential for activating immune responses.
Unlike the primary DRB1 gene, which is expressed in everyone, HLA-DRB4 is only present in individuals with certain DRB1 alleles, especially DRB1*04, *07, or *09. It contributes to immune diversity by adding to the range of peptides presented to T cells.
HLA-DRB4 testing may be recommended in the following scenarios:
HLA-DRB4 typing helps match donors and recipients in hematopoietic stem cell and organ transplantation.
Although DRB1 is the primary match target, DRB4 mismatches—especially in the antigen recognition domain (exon 2)—have been linked to increased risk of graft-versus-host disease and non-relapse mortality.
Type 1 Diabetes & Celiac Disease: DRB4*01:03:01 is strongly associated with children who develop both conditions, especially when part of the DR4-DQ8 haplotype.
Multiple Sclerosis: certain DRB4 alleles are more frequent in MS patients and contribute to disease susceptibility when co-inherited with other HLA-DRB alleles.
In non-small cell lung cancer (NSCLC) patients treated with immune checkpoint inhibitors, HLA-DRB4 positivity was associated with:
DRB4 typing enhances research into autoimmune mechanisms, immunotherapy response, and transplant outcomes. Its presence provides insight into extended HLA haplotypes relevant to immune regulation.
HLA typing is performed to identify a patient's human leukocyte antigen profile for transplantation matching, disease association studies, and antibody screening. There are three main types of HLA testing.
Serologic typing is the classical method, using peripheral blood lymphocytes as the sample.
In this approach, lymphocytes are exposed to a panel of HLA-specific antisera in microplates, and the presence of antigen-antibody binding is determined by complement-mediated cell lysis.
Molecular HLA typing is now the standard, providing high-resolution identification of specific HLA alleles.
It uses DNA extracted from blood or buccal cells. It involves techniques such as sequence-specific oligonucleotide probes (SSOP), sequence-specific primers (SSP), or direct DNA sequencing to detect allele-level differences, particularly important in bone marrow and stem cell transplantation.
HLA antibody screening and crossmatching detect preformed antibodies that may interfere with transplantation.
This testing uses the patient's serum and is typically performed using microlymphocytotoxicity assays, flow cytometry, or Luminex®-based bead technology. Together, these tests support donor matching, predict immune compatibility, and reduce the risk of transplant rejection.
The presence of HLA-DRB4 indicates co-inheritance with specific DRB1 alleles and expanded antigen-presenting ability. In clinical contexts, it may:
If HLA-DRB4 is absent, the individual carries other DRB-linked genes (like DRB3 or DRB5). By itself, the absence may have no clinical impact unless HLA matching or autoimmune profiling is involved. Routine screening is not necessary in the general population.
HLA-DRB4 is a non-primary but clinically meaningful HLA class II gene.
It is relevant to transplant compatibility and autoimmune disease risk (especially T1D and MS) and is emerging as a biomarker for immunotherapy response and toxicity.
Extended HLA typing that includes DRB4 may improve clinical decision-making in high-risk or precision medicine settings.
Akel O, Zhao LP, Geraghty DE, Lind A. High-resolution HLA class II sequencing of Swedish multiple sclerosis patients. Int J Immunogenet. 2022 Oct;49(5):333-339. doi: 10.1111/iji.12594. Epub 2022 Aug 12. PMID: 35959717; PMCID: PMC9545082.
Alshiekh S, Maziarz M, Geraghty DE, Larsson HE, Agardh D. High-resolution genotyping indicates that children with type 1 diabetes and celiac disease share three HLA class II loci in DRB3, DRB4 and DRB5 genes. HLA. 2021 Jan;97(1):44-51. doi: 10.1111/tan.14105. Epub 2020 Nov 9. PMID: 33043613; PMCID: PMC7756432.
Choo SY. The HLA system: genetics, immunology, clinical testing, and clinical implications. Yonsei Med J. 2007 Feb 28;48(1):11-23. doi: 10.3349/ymj.2007.48.1.11. PMID: 17326240; PMCID: PMC2628004.
HLA-DRB4 major histocompatibility complex, class II, DR beta 4 [Homo sapiens (human)] - Gene - NCBI. (n.d.). Www.ncbi.nlm.nih.gov. https://www.ncbi.nlm.nih.gov/gene/3126
Hurley CK, Kempenich J, Wadsworth K, Sauter J, Hofmann JA, Schefzyk D, Schmidt AH, Galarza P, Cardozo MBR, Dudkiewicz M, Houdova L, Jindra P, Sorensen BS, Jagannathan L, Mathur A, Linjama T, Torosian T, Freudenberger R, Manolis A, Mavrommatis J, Cereb N, Manor S, Shriki N, Sacchi N, Ameen R, Fisher R, Dunckley H, Andersen I, Alaskar A, Alzahrani M, Hajeer A, Jawdat D, Nicoloso G, Kupatawintu P, Cho L, Kaur A, Bengtsson M, Dehn J. Common, intermediate and well-documented HLA alleles in world populations: CIWD version 3.0.0. HLA. 2020 Jun;95(6):516-531. doi: 10.1111/tan.13811. Epub 2020 Jan 31. PMID: 31970929; PMCID: PMC7317522.
Jiang CY, Zhao L, Green MD, Ravishankar S, Towlerton AMH, Scott AJ, Raghavan M, Cusick MF, Warren EH, Ramnath N. Class II HLA-DRB4 is a predictive biomarker for survival following immunotherapy in metastatic non-small cell lung cancer. Sci Rep. 2024 Jan 3;14(1):345. doi: 10.1038/s41598-023-48546-y. PMID: 38172168; PMCID: PMC10764770.
Liu, B., Shao, Y., & Fu, R. (2021). Current research status of HLA in immune‐related diseases. Immunity, Inflammation and Disease, 9(2), 340–350. https://doi.org/10.1002/iid3.416
Meng T, Bezstarosti S, Singh U, Yap M, Scott L, Petrosyan N, Quiroz F, Eps NV, Hui EK, Suh D, Zhu Q, Pei R, Kramer CSM, Claas FHJ, Lowe D, Heidt S. Site-directed mutagenesis of HLA molecules reveals the functional epitope of a human HLA-A1/A36-specific monoclonal antibody. HLA. 2023 Feb;101(2):138-142. doi: 10.1111/tan.14895. Epub 2022 Nov 25. PMID: 36401817; PMCID: PMC10099858.
Mosaad, Y. M. (2015). Clinical Role of Human Leukocyte Antigen in Health and Disease. Scandinavian Journal of Immunology, 82(4), 283–306. https://doi.org/10.1111/sji.12329
Ochoa EE, Huda R, Scheibel SF, Nichols JE, Mock DJ, El-Daher N, Domurat FM, Roberts NJ Jr. HLA-associated protection of lymphocytes during influenza virus infection. Virol J. 2020 Aug 24;17(1):128. doi: 10.1186/s12985-020-01406-x. PMID: 32831108; PMCID: PMC7444183.
Tsamadou C, Engelhardt D, Platzbecker U, Sala E, Valerius T, Wagner-Drouet E, Wulf G, Kröger N, Murawski N, Einsele H, Schaefer-Eckart K, Freitag S, Casper J, Kaufmann M, Dürholt M, Hertenstein B, Klein S, Ringhoffer M, Frank S, Neuchel C, Schrezenmeier H, Mytilineos J, Fuerst D. HLA-DRB3/4/5 Matching Improves Outcome of Unrelated Hematopoietic Stem Cell Transplantation. Front Immunol. 2021 Dec 14;12:771449. doi: 10.3389/fimmu.2021.771449. PMID: 34970261; PMCID: PMC8712639.